- Scientific Name
- Crassostrea hongkongensis
- Common Names
- Hong Kong oyster;
- Bioproject
- PRJCA004719
- Biosample
- SAMC351878
- Accession No.
- GWHBAZL00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences
- Contact
- Yang Zhang, yzhang@scsio.ac.cn
- Sequence author(s)
- Yang Zhang
- Released Date
- 2021-05-20
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- AllPaths 2021-04-28
- Sequencing & coverage
- PacBio 31.9
Illumina HiSeq 2500 201.8 - Download
-
DNA
- Publication(s)
- Yang Zhang, et al. Comparative Genomics Reveals Evolutionary Drivers of Sessile Life and Left-right Shell Asymmetry in Bivalves. Genomics, Proteomics & Bioinformatics. 2022.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBAZL00000000 | - | Ch1 | Draft genome in chromosome level | 2021-05-20 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 729,744,563 |
| GC content | 33.24% |
| Genome sequence No. | 5,372 |
| Maximum genome sequence length (bp) | 77,355,223 |
| Minimum genome sequence length (bp) | 210 |
| Average genome sequence length (bp) | 135,842 |
| Genome sequence N50 (bp) | 64,676,433 |
| Genome sequence N90 (bp) | 101,623 |