- Scientific Name
- Taraxacum mongolicum
- Common Names
- -
- Bioproject
- PRJCA005187
- Biosample
- SAMC373587
- Accession No.
- GWHBCHG00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Horticulture, China Agricultural University
- Contact
- Tao Lin, lintao35@cau.edu.cn
- Sequence author(s)
- Tao Lin
- Released Date
- 2021-12-21
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- CANU 2.0
- Sequencing & coverage
- PacBio 100.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Tao Lin, et al. Extensive sequence divergence between reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum. Science China Life Sciences. 2021.
Statistics of Genome Assembly
| Genome size (bp) | 790,004,797 |
| GC content | 37.03% |
| Chromosomes sequence No. | 9 |
Annotation of Whole Genome Assembly
| Protein | Pseudogene | Total | |
|---|---|---|---|
| Chromosome | 54,708 | 12,875 | 67,583 |
| Total | 54,708 | 12,875 | 67,583 |
Annotation Details
| ChrID | Protein | Pseudogene | Total |
|---|---|---|---|
| chr1 | 529 | 146 | 675 |
| chr2 | 8,471 | 1,998 | 10,469 |
| chr3 | 8,596 | 2,069 | 10,665 |
| chr4 | 7,515 | 1,825 | 9,340 |
| chr5 | 5,890 | 1,357 | 7,247 |
| chr6 | 6,536 | 1,516 | 8,052 |
| chr7 | 5,485 | 1,248 | 6,733 |
| chr8 | 6,427 | 1,480 | 7,907 |
| chr9 | 5,259 | 1,236 | 6,495 |
| Total | 54,708 | 12,875 | 67,583 |