- Scientific Name
- Canis lupus
- Common Names
- grey wolf; gray wolf;
- Bioproject
- PRJCA000364
- Biosample
- SAMC010682
- Accession No.
- GWHAAAB00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR012778, CRR012789, CRR012777, CRR012788, CRR012776, more
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
- Contact
- Guo Dong Wang(wanggd@mail.kizz.ac.cn)
- Sequence author(s)
- Guodong Wang
- Released Date
- 2019-10-10
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- Anytag 2.5.2
Newbler --
SSPACE --
GapCloser -- - Sequencing & coverage
- Illumina HiSeq 2000 81.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Guodong Wang, et al. Structural variation during dog domestication: insights from gray wolf and dhole genomes. National Science Review. 2019, 6(1): 110-122.
Statistics of Genome Assembly
| Genome size (bp) | 2,313,311,508 |
| GC content | 40.70% |
| Scaffold sequence No. | 44,203 |
| Maximum scaffold sequence length (bp) | 27,629,335 |
| Minimum scaffold sequence length (bp) | 84 |
| Average scaffold sequence length (bp) | 52,330 |
| Scaffold N50 (bp) | 6,037,699 |
| Scaffold N90 (bp) | 813,143 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 20,797 | 20,797 |