- Scientific Name
- Swietenia macrophylla
- Common Names
- -
- Bioproject
- PRJCA004930
- Biosample
- SAMC353191
- Accession No.
- GWHBCIM00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- School of Life Sciences, Sun Yat-sen University
- Contact
- Xiao Feng, fengx25@mail2.sysu.edu.cn
- Sequence author(s)
- Ziwen He
- Released Date
- 2022-04-27
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- wtdbg2 2.5
- Sequencing & coverage
- PacBio 514
short‑insert 191 - Download
- DNA
- Publication(s)
- Ziwen He, et al. Evolution of coastal forests based on a full set of mangrove genomes. Nature Ecology & Evolution. 2022.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBCIM00000000 | - | Smacrophylla_genome_v1 | Draft genome in scaffold level | 2022-04-27 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 270,800,397 |
| GC content | 32.92% |
| Scaffold sequence No. | 1,363 |
| Maximum scaffold sequence length (bp) | 7,877,045 |
| Minimum scaffold sequence length (bp) | 456 |
| Average scaffold sequence length (bp) | 198,680 |
| Scaffold N50 (bp) | 2,418,160 |
| Scaffold N90 (bp) | 152,978 |