- Scientific Name
- Avicennia officinalis
- Common Names
- -
- Bioproject
- PRJCA004930
- Biosample
- SAMC353219
- Accession No.
- GWHBCJF00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- School of Life Sciences, Sun Yat-sen University
- Contact
- Xiao Feng, fengx25@mail2.sysu.edu.cn
- Sequence author(s)
- Ziwen He
- Released Date
- 2022-04-27
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- Supernova 2.0.1
- Sequencing & coverage
- stLFR 300
- Download
- DNA
- Publication(s)
- Ziwen He, et al. Evolution of coastal forests based on a full set of mangrove genomes. Nature Ecology & Evolution. 2022.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBCJF00000000 | - | Aofficinalis_genome_v1 | Draft genome in scaffold level | 2022-04-27 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 447,055,801 |
| GC content | 33.27% |
| Scaffold sequence No. | 10,896 |
| Maximum scaffold sequence length (bp) | 2,576,723 |
| Minimum scaffold sequence length (bp) | 1,000 |
| Average scaffold sequence length (bp) | 41,029 |
| Scaffold N50 (bp) | 199,391 |
| Scaffold N90 (bp) | 17,255 |