- Scientific Name
- Barringtonia asiatica
- Common Names
- fish-poison-tree;
- Bioproject
- PRJCA004930
- Biosample
- SAMC353236
- Accession No.
- GWHBCKA00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- School of Life Sciences, Sun Yat-sen University
- Contact
- Xiao Feng, fengx25@mail2.sysu.edu.cn
- Sequence author(s)
- Ziwen He
- Released Date
- 2022-04-27
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- wtdbg2 2.5
- Sequencing & coverage
- PacBio 164
short‑insert 55 - Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Ziwen He, et al. Evolution of coastal forests based on a full set of mangrove genomes. Nature Ecology & Evolution. 2022.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBCKA00000000 | - | Basiatica_genome_v1 | Draft genome in scaffold level | 2022-04-27 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 787,469,813 |
| GC content | 37.14% |
| Scaffold sequence No. | 452 |
| Maximum scaffold sequence length (bp) | 28,310,629 |
| Minimum scaffold sequence length (bp) | 3,927 |
| Average scaffold sequence length (bp) | 1,742,190 |
| Scaffold N50 (bp) | 9,731,143 |
| Scaffold N90 (bp) | 2,087,718 |