- Scientific Name
- Lagerstroemia speciosa
- Common Names
- pride-of-India,pyinma,queen\'s crape-myrtle,reseda-flor-da-rainha; Lagerstroemia macrocarpa
- Bioproject
- PRJCA004930
- Biosample
- SAMC353201
- Accession No.
- GWHBCKL00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- School of Life Sciences, Sun Yat-sen University
- Contact
- Xiao Feng, fengx25@mail2.sysu.edu.cn
- Sequence author(s)
- Ziwen He
- Released Date
- 2022-04-27
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- wtdbg2 2.5
3D-DNA 180922 - Sequencing & coverage
- PacBio 299
Hi-C 169
short‑insert 128 - Download
-
DNA
- Publication(s)
- Ziwen He, et al. Evolution of coastal forests based on a full set of mangrove genomes. Nature Ecology & Evolution. 2022.
Statistics of Genome Assembly
| Genome size (bp) | 319,662,159 |
| GC content | 40.40% |
| Genome sequence No. | 629 |
| Maximum genome sequence length (bp) | 17,343,122 |
| Minimum genome sequence length (bp) | 420 |
| Average genome sequence length (bp) | 508,207 |
| Genome sequence N50 (bp) | 12,743,840 |
| Genome sequence N90 (bp) | 10,542,406 |