- Scientific Name
- Avicennia marina subsp. marina
- Common Names
- Avicennia marina var. marina
- Bioproject
- PRJCA004930
- Biosample
- SAMC353214
- Accession No.
- GWHBCKT00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- School of Life Sciences, Sun Yat-sen University
- Contact
- Xiao Feng, fengx25@mail2.sysu.edu.cn
- Sequence author(s)
- Ziwen He
- Released Date
- 2022-04-27
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- 3D-DNA 180922
- Sequencing & coverage
- PacBio 34
Hi-C 233
short‑insert 65 - Download
- DNA
- Publication(s)
- Ziwen He, et al. Evolution of coastal forests based on a full set of mangrove genomes. Nature Ecology & Evolution. 2022.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBCKT00000000 | - | Amarinama_genome_v3 | Draft genome in chromosome level | 2022-04-27 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 457,801,901 |
| GC content | 33.45% |
| Genome sequence No. | 400 |
| Maximum genome sequence length (bp) | 22,665,500 |
| Minimum genome sequence length (bp) | 1,000 |
| Average genome sequence length (bp) | 1,144,505 |
| Genome sequence N50 (bp) | 14,145,500 |
| Genome sequence N90 (bp) | 11,236,000 |