- Scientific Name
- Capitulum mitella
- Common Names
- Pollicipes mitella
- Bioproject
- PRJCA004914
- Biosample
- SAMC352665
- Accession No.
- GWHBAVK00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- college of life science, Fujian Normal University
- Contact
- Gang Lin(zhuang@fjnu.edu.cn)
- Sequence author(s)
- Gang Lin
- Released Date
- 2021-07-02
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- SOAPdenovo 1.2
- Sequencing & coverage
- PacBio 100.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Duo Chen, et al. Chromosome Genome Assembly and Annotation of the Capitulum mitella With PacBioand Hi-C Sequencing Data. Frontiers in Genetics. 2021, 12.
Statistics of Genome Assembly
| Genome size (bp) | 477,800,915 |
| GC content | 50.41% |
| Chromosomes sequence No. | 16 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 8,080 | 8,080 |
| Total | 8,080 | 8,080 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 858 | 858 |
| chr10 | 577 | 577 |
| chr11 | 500 | 500 |
| chr12 | 397 | 397 |
| chr13 | 374 | 374 |
| chr14 | 245 | 245 |
| chr15 | 281 | 281 |
| chr16 | 349 | 349 |
| chr2 | 677 | 677 |
| chr3 | 595 | 595 |
| chr4 | 571 | 571 |
| chr5 | 536 | 536 |
| chr6 | 552 | 552 |
| chr7 | 557 | 557 |
| chr8 | 530 | 530 |
| chr9 | 481 | 481 |
| Total | 8,080 | 8,080 |