- Scientific Name
- Dimocarpus longan
- Common Names
- longan; Euphoria longana
- Bioproject
- PRJCA005305
- Biosample
- SAMC397174
- Accession No.
- GWHBDNI00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences
- Contact
- Jing Wang, wangjing@gdaas.cn
- Sequence author(s)
- Jing Wang
- Released Date
- 2022-05-23
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Canu 1.9
- Sequencing & coverage
- PacBio 95.9
- Download
-
DNA
GFF
RNA
Protein
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 454,299,200 |
| GC content | 33.93% |
| Chromosomes sequence No. | 15 |
| Genome sequence No. | 90 |
| Maximum genome sequence length (bp) | 46,642,598 |
| Minimum genome sequence length (bp) | 1,406 |
| Average genome sequence length (bp) | 5,047,769 |
| Genome sequence N50 (bp) | 29,551,905 |
| Genome sequence N90 (bp) | 22,277,590 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 40,946 | 40,946 |
| Others | 1,209 | 1,209 |
| Total | 42,155 | 42,155 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 4,487 | 4,487 |
| chr10 | 2,193 | 2,193 |
| chr11 | 2,301 | 2,301 |
| chr12 | 1,922 | 1,922 |
| chr13 | 2,752 | 2,752 |
| chr14 | 2,321 | 2,321 |
| chr15 | 2,226 | 2,226 |
| chr2 | 3,147 | 3,147 |
| chr3 | 3,063 | 3,063 |
| chr4 | 3,376 | 3,376 |
| chr5 | 2,833 | 2,833 |
| chr6 | 2,558 | 2,558 |
| chr7 | 2,713 | 2,713 |
| chr8 | 2,327 | 2,327 |
| chr9 | 2,727 | 2,727 |
| Others | 1,209 | 1,209 |
| Total | 42,155 | 42,155 |