Scientific Name
Gastrodia elata
Common Names
-
Bioproject
PRJCA005619
Biosample
SAMC430501
Accession No.
GWHBDNU00000000
GSA raw reads
CRR301082
GVM variations
-
Submitter Organization
Kunming Institute of Botany, Chinese Academy of Sciences
Contact
Jianqiang Wu, wujianqiang@mail.kib.ac.cn
Sequence author(s)
Yuxing Xu
Released Date
2021-07-14
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
Celera Assembler v1.9
Sequencing & coverage
PacBio 100.0
Download
DNA GFF RNA Protein
Publication(s)
-
Assembly Accession Assembly Name Assembly Level Release Date Download Files
GWHBDNU00000000 Gel_v2.0 Draft genome in chromosome level 2021-07-14 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 1,036,742,279
GC content 34.49%
Chromosomes sequence No. 18
Organellas sequence No. 1
Genome sequence No. 39
Maximum genome sequence length (bp) 132,907,784
Minimum genome sequence length (bp) 13,502
Average genome sequence length (bp) 26,583,135
Genome sequence N50 (bp) 51,759,935
Genome sequence N90 (bp) 36,350,181
Annotation of Whole Genome Assembly
Protein Total
Chromosome 33,365 33,365
Chloroplast 5 5
Others 191 191
Total 33,561 33,561
Annotation Details
ChrID Protein Total
chr1 2,595 2,595
chr10 1,795 1,795
chr11 1,692 1,692
chr12 1,681 1,681
chr13 1,512 1,512
chr14 1,662 1,662
chr15 1,334 1,334
chr16 1,157 1,157
chr17 1,042 1,042
chr18 1,143 1,143
chr2 2,815 2,815
chr3 2,651 2,651
chr4 2,596 2,596
chr5 2,315 2,315
chr6 1,839 1,839
chr7 1,876 1,876
chr8 1,796 1,796
chr9 1,864 1,864
Chloroplast 5 5
Others 191 191
Total 33,561 33,561