Genome Warehouse

Scientific Name: Ilex polyneura
Common Names: -
Bioproject: PRJCA005739
Biosample: SAMC430737
Accession No.: GWHBDNW00000000
GWH reannotation accession: -
GSA raw reads: -
GVM variations of the species: -
Submitter Organization: Center of Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences
Contact: Xin Yao, yaoxin@xtbg.org.cn
Sequence author(s): Xin Yao
Released Date: 2021-09-12
Assembly Level: Draft genome in chromosome level
Genome Representation: Partial Genome ( Nuclear )
Assembly method: NextDenovo 2.3.0
Sequencing & coverage: PacBio 100.0
Download: DNA GFF RNA Protein
Publication(s): Xin Yao, et al. A chromosome-scale genome assembly for the holly (Ilex polyneura) providesinsights into genomic adaptations to elevation in Southwest China. Horticulture Research. 2022, 9.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHBDNW00000000	-	dongqing	Draft genome in scaffold level	2021-09-12	DNA GFF RNA Protein

Genome size (bp)	727,144,267
GC content	36.08%
Genome sequence No.	62
Maximum genome sequence length (bp)	64,863,080
Minimum genome sequence length (bp)	20,000
Average genome sequence length (bp)	11,728,133
Genome sequence N50 (bp)	36,593,620
Genome sequence N90 (bp)	25,719,167

Annotation of Whole Genome Assembly

	Protein	Total
Total	32,253	32,253