- Scientific Name
- Babesia duncani
- Common Names
- -
- Bioproject
- PRJCA005923
- Biosample
- SAMC434677
- Accession No.
- GWHBECJ00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR304452
- GVM variations of the species
- -
- Submitter Organization
- vector and vector borne disease, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences
- Contact
- Jinming Wang, wjm0403@caas.cn
- Sequence author(s)
- Jinming Wang
- Released Date
- 2021-08-19
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Partial Genome ( Nuclear )
- Assembly method
- NECAT NECAT (v0.0.1)
Canu Canu (v2.2.2) - Sequencing & coverage
- Oxford nanopore technology 98.1
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Jinming Wang, et al. Comparative genomic analysis of Babesia duncani responsible for human babesiosis. BMC Biology. 2022, 20(1): 153.
Statistics of Genome Assembly
| Genome size (bp) | 7,857,449 |
| GC content | 37.68% |
| Scaffold sequence No. | 7 |
| Maximum scaffold sequence length (bp) | 2,227,869 |
| Minimum scaffold sequence length (bp) | 438,020 |
| Average scaffold sequence length (bp) | 1,122,493 |
| Scaffold N50 (bp) | 1,067,452 |
| Scaffold N90 (bp) | 515,956 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 3,759 | 3,759 |