- Scientific Name
- Jasminum sambac
- Common Names
- Arabian jasmine;
- Bioproject
- PRJCA006739
- Biosample
- SAMC463593
- Accession No.
- GWHBFHJ00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Horticulture, Fujian Agriculture and Forestry University
- Contact
- Naixing Ye, ynxtea@126.com
- Sequence author(s)
- Naixing Ye
- Released Date
- 2021-11-28
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm+allhic release date : 2022-01-01
- Sequencing & coverage
- PacBio 30.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Pengjie Wang, et al. Genomes of single- and double-petal jasmines (Jasminum sambac) provide insights into their divergence time and structural variations. Plant Biotechnology Journal. 2022.
Statistics of Genome Assembly
| Genome size (bp) | 487,059,642 |
| GC content | 34.65% |
| Super-scaffold sequence No. | 286 |
| Maximum super-scaffold sequence length (bp) | 45,552,263 |
| Minimum super-scaffold sequence length (bp) | 1,000 |
| Average super-scaffold sequence length (bp) | 1,703,006 |
| Super-scaffold N50 (bp) | 36,946,876 |
| Super-scaffold N90 (bp) | 30,907,046 |
| Contig sequence No. | 1,211 |
| Maximum contig sequence length (bp) | 25,052,000 |
| Minimum contig sequence length (bp) | 883 |
| Average contig sequence length (bp) | 402,121 |
| Contig N50 (bp) | 4,075,000 |
| Contig N90 (bp) | 451,999 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 23,574 | 23,574 |