- Scientific Name
- Jasminum sambac
- Common Names
- Arabian jasmine;
- Bioproject
- PRJCA006739
- Biosample
- SAMC463592
- Accession No.
- GWHBFHK00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Horticulture, Fujian Agriculture and Forestry University
- Contact
- Naixing Ye, ynxtea@126.com
- Sequence author(s)
- Naixing Ye
- Released Date
- 2021-11-28
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm+allhic release date : 2022-01-01
- Sequencing & coverage
- PacBio 30.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Pengjie Wang, et al. Genomes of single- and double-petal jasmines (Jasminum sambac) provide insights into their divergence time and structural variations. Plant Biotechnology Journal. 2022.
Statistics of Genome Assembly
| Genome size (bp) | 502,285,282 |
| GC content | 34.60% |
| Super-scaffold sequence No. | 44 |
| Maximum super-scaffold sequence length (bp) | 46,798,950 |
| Minimum super-scaffold sequence length (bp) | 20,174 |
| Average super-scaffold sequence length (bp) | 11,415,575 |
| Super-scaffold N50 (bp) | 39,706,105 |
| Super-scaffold N90 (bp) | 31,659,424 |
| Contig sequence No. | 234 |
| Maximum contig sequence length (bp) | 21,779,584 |
| Minimum contig sequence length (bp) | 11,589 |
| Average contig sequence length (bp) | 2,146,442 |
| Contig N50 (bp) | 6,511,791 |
| Contig N90 (bp) | 2,097,018 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 24,002 | 24,002 |