- Scientific Name
- Crassostrea hongkongensis
- Common Names
- Hong Kong oyster;
- Bioproject
- PRJCA007058
- Biosample
- SAMC476444
- Accession No.
- GWHBFSR00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Key Laboratory of South China Sea Fishery Resources Exploitation and Utilization, Ministry of Agriculture, South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences
- Contact
- Jing-Zhe Jiang(jingzhejiang@hotmail.com)
- Sequence author(s)
- Jing-Zhe Jiang
- Released Date
- 2022-08-16
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Partial Genome
- Assembly method
- Megahit 1.2.9
- Sequencing & coverage
- Illumina-Solexa 0.1
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Jingzhe Jiang, et al. A remarkably diverse and well-organized virus community in a filter-feedingoyster. Microbiome. 2023, 11.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBFSR00000000 | - | DOV | Draft genome in contig level | 2022-08-16 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,087,119,400 |
| GC content | 43.84% |
| Contig sequence No. | 728,784 |
| Maximum contig sequence length (bp) | 260,277 |
| Minimum contig sequence length (bp) | 800 |
| Average contig sequence length (bp) | 1,492 |
| Contig N50 (bp) | 1,449 |
| Contig N90 (bp) | 873 |