- Scientific Name
- Rhizophora stylosa
- Common Names
- -
- Bioproject
- PRJCA001504
- Biosample
- SAMC131577
- Accession No.
- GWHBGBK00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR113094
- GVM variations of the species
- -
- Submitter Organization
- School of Life Sciences, Sun Yat-sen University
- Contact
- Xinfeng Wang, 1483672992@qq.com
- Sequence author(s)
- Xinfeng Wang
- Released Date
- 2023-01-01
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Supernova2.0.1 Supernova2.0.1
- Sequencing & coverage
- 10x genomic + Hi-C 164.0
- Download
- DNA
- Publication(s)
- Xinfeng Wang, et al. Extensive gene flow in secondary sympatry after allopatric speciation. National Science Review. 2022, 9(12).
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBGBK00000000 | - | Rhizophora_stylosa.fa | Draft genome in chromosome level | 2023-01-01 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 219,666,082 |
| GC content | 35.78% |
| Chromosomes sequence No. | 18 |
| Genome sequence No. | 317 |
| Maximum genome sequence length (bp) | 19,113,862 |
| Minimum genome sequence length (bp) | 2,016 |
| Average genome sequence length (bp) | 692,953 |
| Genome sequence N50 (bp) | 12,648,140 |
| Genome sequence N90 (bp) | 8,376,433 |