- Scientific Name
- Camellia chekiangoleosa
- Common Names
- Camellia chekiang-oleosa
- Bioproject
- PRJCA007476
- Biosample
- SAMC532308
- Accession No.
- GWHBGBN00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Forestry, Nanjing Forestry University
- Contact
- Li-an Xu, laxu@njfu.edu.cn
- Sequence author(s)
- Li-an Xu, Fu-liang Cao, Qiang Wen
- Released Date
- 2021-12-08
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm v0.13
- Sequencing & coverage
- PacBio 19.0
Illumina HiSeq 4000 102.0 - Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Teng-fei Shen, et al. The reference genome of Camellia chekiangoleosa provides insights into Camelliaevolution and tea oil biosynthesis. Horticulture Research. 2022, 9.
Statistics of Genome Assembly
| Genome size (bp) | 2,730,418,940 |
| GC content | 38.82% |
| Chromosomes sequence No. | 15 |
| Genome sequence No. | 154 |
| Maximum genome sequence length (bp) | 216,219,132 |
| Minimum genome sequence length (bp) | 11,065 |
| Average genome sequence length (bp) | 17,729,993 |
| Genome sequence N50 (bp) | 185,252,766 |
| Genome sequence N90 (bp) | 132,293,375 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 63,807 | 63,807 |
| Others | 577 | 577 |
| Total | 64,384 | 64,384 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 5,499 | 5,499 |
| chr10 | 3,940 | 3,940 |
| chr11 | 3,390 | 3,390 |
| chr12 | 3,581 | 3,581 |
| chr13 | 3,965 | 3,965 |
| chr14 | 2,754 | 2,754 |
| chr15 | 3,327 | 3,327 |
| chr2 | 4,807 | 4,807 |
| chr3 | 5,085 | 5,085 |
| chr4 | 5,058 | 5,058 |
| chr5 | 4,571 | 4,571 |
| chr6 | 4,391 | 4,391 |
| chr7 | 4,832 | 4,832 |
| chr8 | 4,042 | 4,042 |
| chr9 | 4,565 | 4,565 |
| Others | 577 | 577 |
| Total | 64,384 | 64,384 |