- Scientific Name
- Cyclocarya paliurus
- Common Names
- qing qian liu;
- Bioproject
- PRJCA004670
- Biosample
- SAMC345657
- Accession No.
- GWHBEHY00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Fujian Normal University, Fujian Normal University
- Contact
- Ting Xue, xueting@fjnu.edu.cn
- Sequence author(s)
- Ting Xue
- Released Date
- 2021-12-18
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifi 2
- Sequencing & coverage
- PacBio 30.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- XuehaiZheng, et al. Insights into the evolution and hypoglycemic metabolite biosynthesis of autotetraploid Cyclocarya paliurus by combining genomic, transcriptomic and metabolomic analyses. Industrial Crops and Products. 2021, 173:114154.
Statistics of Genome Assembly
| Genome size (bp) | 633,442,374 |
| GC content | 37.35% |
| Genome sequence No. | 984 |
| Maximum genome sequence length (bp) | 61,546,322 |
| Minimum genome sequence length (bp) | 18,786 |
| Average genome sequence length (bp) | 643,742 |
| Genome sequence N50 (bp) | 34,209,497 |
| Genome sequence N90 (bp) | 333,691 |
Annotation of Whole Genome Assembly
| Protein | Others | Total | |
|---|---|---|---|
| Total | 56,403 | 1 | 56,404 |