- Scientific Name
- Cinnamomum camphora
- Common Names
- camphor tree;
- Bioproject
- PRJCA007611
- Biosample
- SAMC536840
- Accession No.
- GWHBGBX00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Forestry, Nanjing Forestry University
- Contact
- Meng Xu, xum@njfu.edu.cn
- Sequence author(s)
- Tengfei Shen
- Released Date
- 2021-12-18
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm v0.13
- Sequencing & coverage
- PacBio 19.0
- Download
-
DNA
GFF
RNA
Protein
- Publication(s)
- Tengfei Shen, et al. The chromosome-level genome sequence of the camphor tree provides insights into Lauraceae evolution and terpene biosynthesis. Plant Biotechnology Journal. 2021.
Statistics of Genome Assembly
| Genome size (bp) | 670,290,913 |
| GC content | 38.27% |
| Chromosomes sequence No. | 12 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 37,295 | 37,295 |
| Total | 37,295 | 37,295 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 4,672 | 4,672 |
| chr10 | 2,220 | 2,220 |
| chr11 | 2,423 | 2,423 |
| chr12 | 1,879 | 1,879 |
| chr2 | 4,250 | 4,250 |
| chr3 | 4,402 | 4,402 |
| chr4 | 3,988 | 3,988 |
| chr5 | 3,407 | 3,407 |
| chr6 | 2,603 | 2,603 |
| chr7 | 2,619 | 2,619 |
| chr8 | 2,532 | 2,532 |
| chr9 | 2,300 | 2,300 |
| Total | 37,295 | 37,295 |