- Scientific Name
- Pyricularia oryzae
- Common Names
- rice blast fungus; Magnaporthe oryzae B.C. Couch, 2002, Magnaporthe oryzae
- Bioproject
- PRJCA007836
- Biosample
- SAMC543435
- Accession No.
- GWHBHAJ00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR362057
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan Agricultural University
- Contact
- qiong luo(qiongbf@aliyun.com)
- Sequence author(s)
- qiong luo
- Released Date
- 2022-04-05
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- NextDenovo 2.4.0
- Sequencing & coverage
- PacBio 114.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Xingli Wang, et al. Genome Sequence Resource of an Avirulent Magnaporthe oryzae Field Strain AM16. Plant Disease. 2022.
Statistics of Genome Assembly
| Genome size (bp) | 43,623,989 |
| GC content | 51.11% |
| Contig sequence No. | 47 |
| Maximum contig sequence length (bp) | 7,278,034 |
| Minimum contig sequence length (bp) | 12,490 |
| Average contig sequence length (bp) | 928,170 |
| Contig N50 (bp) | 3,756,959 |
| Contig N90 (bp) | 336,235 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 13,303 | 13,303 |