- Scientific Name
- Aegilops sharonensis
- Common Names
- -
- Bioproject
- PRJCA007359
- Biosample
- SAMC490530
- Accession No.
- GWHBFXV00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Key laboratory of Molecular Epigenetics of the Ministry of Education, Northeast Normal University
- Contact
- Ning Li, lin690@nenu.edu.cn
- Sequence author(s)
- Ning Li
- Released Date
- 2022-04-12
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- wtdbg2 version 2
- Sequencing & coverage
- Oxford Nanopore 131.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBFXV00000000 | - | Aegilops sharonensis 01 | Draft genome in chromosome level | 2021-12-25 |
DNA
|
| GWHBFXV00000000.1 | - | Aegilops sharonensis | Draft genome in chromosome level | 2022-04-12 |
DNA
GFF
RNA
CDS
Protein
|
Statistics of Genome Assembly
| Genome size (bp) | 5,892,910,216 |
| GC content | 46.24% |
| Chromosomes sequence No. | 7 |
| Genome sequence No. | 22,664 |
| Maximum genome sequence length (bp) | 839,451,269 |
| Minimum genome sequence length (bp) | 1,364 |
| Average genome sequence length (bp) | 260,012 |
| Genome sequence N50 (bp) | 703,022,076 |
| Genome sequence N90 (bp) | 150,827 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 36,417 | 36,417 |
| Others | 1,974 | 1,974 |
| Total | 38,391 | 38,391 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 4,574 | 4,574 |
| chr2 | 6,122 | 6,122 |
| chr3 | 5,799 | 5,799 |
| chr4 | 3,810 | 3,810 |
| chr5 | 5,697 | 5,697 |
| chr6 | 4,341 | 4,341 |
| chr7 | 6,074 | 6,074 |
| Others | 1,974 | 1,974 |
| Total | 38,391 | 38,391 |