- Scientific Name
- Aegilops bicornis
- Common Names
- Triticum bicorne
- Bioproject
- PRJCA007359
- Biosample
- SAMC490533
- Accession No.
- GWHBFXS00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Key laboratory of Molecular Epigenetics of the Ministry of Education, Northeast Normal University
- Contact
- Ning Li, lin690@nenu.edu.cn
- Sequence author(s)
- Ning Li
- Released Date
- 2022-04-12
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- NextDenovo v2.3.1
- Sequencing & coverage
- Oxford Nanopore 139.0
- Download
-
DNA
GFF
RNA
Protein
- Publication(s) -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBFXS00000000 | - | Aegilops bicornis 01 | Draft genome in chromosome level | 2021-12-25 |
DNA
|
| GWHBFXS00000000.1 | - | Aegilops bicornis | Draft genome in chromosome level | 2022-04-12 |
DNA
GFF
RNA
Protein
|
Statistics of Genome Assembly
| Genome size (bp) | 5,640,741,098 |
| GC content | 46.42% |
| Chromosomes sequence No. | 7 |
| Genome sequence No. | 1,009 |
| Maximum genome sequence length (bp) | 873,736,323 |
| Minimum genome sequence length (bp) | 71,465 |
| Average genome sequence length (bp) | 5,590,427 |
| Genome sequence N50 (bp) | 747,636,010 |
| Genome sequence N90 (bp) | 674,339,718 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 37,745 | 37,745 |
| Others | 2,444 | 2,444 |
| Total | 40,189 | 40,189 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 4,657 | 4,657 |
| chr2 | 6,353 | 6,353 |
| chr3 | 6,002 | 6,002 |
| chr4 | 4,181 | 4,181 |
| chr5 | 5,861 | 5,861 |
| chr6 | 4,614 | 4,614 |
| chr7 | 6,077 | 6,077 |
| Others | 2,444 | 2,444 |
| Total | 40,189 | 40,189 |