- Scientific Name
- Acinetobacter baumannii
- Common Names
- Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum
- Bioproject
- PRJCA008869
- Biosample
- SAMC703785
- Accession No.
- GWHBHYD00000000
- GWH reannotation accession
- GWHRA_BHYD00000000.1
- GSA raw reads
- CRR452582
- GVM variations of the species
- -
- Submitter Organization
- Respiratory and Critical Care Medicine, Chinese PLA General Hospital
- Contact
- Xuming Li(lixuming@hugobiotech.com), Hui Zhou(zhouhui@hugobiotech.com), Zhimei Duan(549117002@qq.com)
- Sequence author(s)
- Xuming Li, Hui Zhou, Zhimei Duan
- Released Date
- 2024-03-28
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- Unicycler v0.4.8
- Sequencing & coverage
- Illumina NovaSeq 6000 580
- Download
- DNA
- Reannotation Download
- Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBHYD00000000 | GWHRA_BHYD00000000.1 | ABA-145_asm | Draft genome in contig level | 2024-03-28 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,127,547 |
| GC content | 38.79% |
| Contig sequence No. | 182 |
| Maximum contig sequence length (bp) | 364,158 |
| Minimum contig sequence length (bp) | 501 |
| Average contig sequence length (bp) | 22,679 |
| Contig N50 (bp) | 140,586 |
| Contig N90 (bp) | 17,335 |
Statistics of Genome Assembly
| Genome size (bp) | 4,127,547 |
| GC content | 38.79% |
| Contig sequence No. | 182 |
| Maximum contig sequence length (bp) | 364,158 |
| Minimum contig sequence length (bp) | 501 |
| Average contig sequence length (bp) | 22,679 |
| Contig N50 (bp) | 140,586 |
| Contig N90 (bp) | 17,335 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3,937 | 63 | 3 | 1 | 69 | 193 | 4,266 |