- Scientific Name
- Acinetobacter baumannii
- Common Names
- Acinetobacter genomosp. 2, Acinetobacter genomospecies 2, Bacterium anitratum
- Bioproject
- PRJCA008869
- Biosample
- SAMC703920
- Accession No.
- GWHBIDI00000000
- GWH reannotation accession
- GWHRA_BIDI00000000.1
- GSA raw reads
- CRR452717
- GVM variations of the species
- -
- Submitter Organization
- Respiratory and Critical Care Medicine, Chinese PLA General Hospital
- Contact
- Xuming Li(lixuming@hugobiotech.com), Hui Zhou(zhouhui@hugobiotech.com), Zhimei Duan(549117002@qq.com)
- Sequence author(s)
- Xuming Li, Hui Zhou, Zhimei Duan
- Released Date
- 2024-03-28
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- Unicycler v0.4.8
- Sequencing & coverage
- Illumina NovaSeq 6000 654
- Download
- DNA
- Reannotation Download
- Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBIDI00000000 | GWHRA_BIDI00000000.1 | ABA-313_asm | Draft genome in contig level | 2024-03-28 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 3,963,914 |
| GC content | 38.83% |
| Contig sequence No. | 76 |
| Maximum contig sequence length (bp) | 292,359 |
| Minimum contig sequence length (bp) | 512 |
| Average contig sequence length (bp) | 52,157 |
| Contig N50 (bp) | 167,724 |
| Contig N90 (bp) | 46,059 |
Statistics of Genome Assembly
| Genome size (bp) | 3,963,914 |
| GC content | 38.83% |
| Contig sequence No. | 76 |
| Maximum contig sequence length (bp) | 292,359 |
| Minimum contig sequence length (bp) | 512 |
| Average contig sequence length (bp) | 52,157 |
| Contig N50 (bp) | 167,724 |
| Contig N90 (bp) | 46,059 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3,743 | 62 | 3 | 1 | 58 | 86 | 3,953 |