Scientific Name
Eucommia ulmoides
Common Names
-
Bioproject
PRJCA005994
Biosample
SAMC436989
Accession No.
GWHBISF00000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
College of biological science technology, Beijing Forestry University
Contact
Yun Li, liyun1365@163.com
Sequence author(s)
Xiangyang Kang, Yun Li
Released Date
2022-04-26
Assembly Level
Draft genome in chromosome level
Genome Representation
Partial Genome ( Nuclear )
Assembly method
FALCON v. 0.7
Quiver v. 5.0.1
Pilon v. 1.18
SAMTOOLS v. 1.3
Sequencing & coverage
PacBio 95.07
Hi-C 130.0
Illumina 138.86
Download
DNA GFF RNA Protein
Publication(s)
Yun Li, et al. High-quality de novo assembly of the Eucommia ulmoides haploid genome provides new insights into evolution and rubber biosynthesis. Horticulture Research. 2020, 7(1): 183.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHBISF00000000 - EU17 Draft genome in scaffold level 2022-04-26 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 947,857,663
GC content 35.17%
Genome sequence No. 501
Maximum genome sequence length (bp) 79,924,447
Minimum genome sequence length (bp) 330
Average genome sequence length (bp) 1,891,931
Genome sequence N50 (bp) 53,150,112
Genome sequence N90 (bp) 43,436,084
Annotation of Whole Genome Assembly
Protein Total
Total 25,477 25,477