Genome Warehouse

Scientific Name: Ilex latifolia
Common Names: tara-yo;
Bioproject: PRJCA008745
Biosample: SAMC689177
Accession No.: GWHBIST00000000
GWH reannotation accession: -
GSA raw reads: -
GVM variations of the species: -
Submitter Organization: College of Biology and the Environment, Nanjing Forestry University
Contact: Kewang Xu, xukw10@njfu.edu.cn
Sequence author(s): Kewang Xu
Released Date: 2023-04-01
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: Smartdenovo 1.0
Sequencing & coverage: Illumina HiSeq X Ten 61.0
Oxford Nanopore PromethION 107.0
Download: DNA GFF RNA Protein
Publication(s): Kewang Xu, et al. The chromosome-level holly (Ilex latifolia) genome reveals key enzymes in triterpenoid saponin biosynthesis and fruit color change. Frontiers in Plant Science. 2022, 13: 982323.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHBIST00000000	-	Lachesis_assembly_changed	Draft genome in scaffold level	2023-04-01	DNA GFF RNA Protein

Genome size (bp)	766,017,350
GC content	36.44%
Genome sequence No.	355
Maximum genome sequence length (bp)	56,602,566
Minimum genome sequence length (bp)	46,637
Average genome sequence length (bp)	2,157,795
Genome sequence N50 (bp)	33,446,872
Genome sequence N90 (bp)	24,069,099

Annotation of Whole Genome Assembly

	Protein	Total
Total	35,217	35,217