- Scientific Name
- Hordeum marinum
- Common Names
- seaside barley;
- Bioproject
- PRJCA009391
- Biosample
- SAMC742652
- Accession No.
- GWHBJBH00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Department of Agronomy, Zhejiang University
- Contact
- Liuhui Kuang, kuangliuhui@zju.edu.cn
- Sequence author(s)
- Liuhui Kuang
- Released Date
- 2022-05-10
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Falcon+Quiver+Plion+Bowtie+Lachesis 1.0
- Sequencing & coverage
- PacBio 81.3
Illumina HiSeq 4000 197.3
Hi-C 108.7
10X Genomics 97.1 - Download
- DNA GFF RNA Protein
- Publication(s)
- Liuhui Kuang. The genome and gene editing system of sea barleygrass provide a novel platform for cereal domestication and stress tolerance studies. Plant Communications. 2022.
Statistics of Genome Assembly
| Genome size (bp) | 3,815,965,547 |
| GC content | 44.53% |
| Genome sequence No. | 1,197 |
| Maximum genome sequence length (bp) | 588,092,371 |
| Minimum genome sequence length (bp) | 242 |
| Average genome sequence length (bp) | 3,187,941 |
| Genome sequence N50 (bp) | 524,471,465 |
| Genome sequence N90 (bp) | 450,127,416 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 73,907 | 73,907 |