Genome Warehouse

Scientific Name: Hordeum marinum
Common Names: seaside barley;
Bioproject: PRJCA009391
Biosample: SAMC742652
Accession No.: GWHBJBH00000000
GWH reannotation accession: -
GSA raw reads: -
GVM variations of the species: -
Submitter Organization: Department of Agronomy, Zhejiang University
Contact: Liuhui Kuang, kuangliuhui@zju.edu.cn
Sequence author(s): Liuhui Kuang
Released Date: 2022-05-10
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: Falcon+Quiver+Plion+Bowtie+Lachesis 1.0
Sequencing & coverage: PacBio 81.3
Illumina HiSeq 4000 197.3
Hi-C 108.7
10X Genomics 97.1
Download: DNA GFF RNA CDS Protein
Publication(s): Liuhui Kuang. The genome and gene editing system of sea barleygrass provide a novel platform for cereal domestication and stress tolerance studies. Plant Communications. 2022.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHBJBH00000000	-	H559	Draft genome in chromosome level	2022-05-10	DNA GFF RNA CDS Protein

Genome size (bp)	3,815,965,547
GC content	44.53%
Genome sequence No.	1,197
Maximum genome sequence length (bp)	588,092,371
Minimum genome sequence length (bp)	242
Average genome sequence length (bp)	3,187,941
Genome sequence N50 (bp)	524,471,465
Genome sequence N90 (bp)	450,127,416

Annotation of Whole Genome Assembly

	Protein	Total
Total	73,907	73,907