- Scientific Name
- Solanum lycopersicum
- Common Names
- tomato; Lycopersicon esculentum, Lycopersicon esculentum var. esculentum, Solanum esculentum, Solanum lycopersicum var. humboldtii
- Bioproject
- PRJCA009539
- Biosample
- SAMC754048
- Accession No.
- GWHBJBJ00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 26,938,825 (SNP), 3,724,480 (Indel)
- Submitter Organization
- -, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences
- Contact
- xia cui, cuixia@caas.cn
- Sequence author(s)
- xia cui
- Released Date
- 2022-05-12
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- HiFiasm 0.16.1
- Sequencing & coverage
- PacBio 98.61
- Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBJBJ00000000 | - | PP | Draft genome in chromosome level | 2022-05-12 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 848,496,940 |
| GC content | 35.01% |
| Genome sequence No. | 13 |
| Maximum genome sequence length (bp) | 95,071,404 |
| Minimum genome sequence length (bp) | 14,219,973 |
| Average genome sequence length (bp) | 65,268,995 |
| Genome sequence N50 (bp) | 69,171,522 |
| Genome sequence N90 (bp) | 60,155,683 |