- Scientific Name
- Circovirus
- Common Names
- -
- Bioproject
- PRJCA010128
- Biosample
- SAMC802613
- Accession No.
- GWHBJST01000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Life Science and Technology, Beijing University of Chemical Technology
- Contact
- Jing Li(frostli@163.com)
- Sequence author(s)
- Fengjuan Tian, Jing Li, Wenli Liu, Yujie Liu, Yunjia Hu, Qihang Tu, Yang Li, Yang Li, Yu Bai, Mang Shi, Tengcheng Que, Yanling Hu, Yigang Tong
- Released Date
- 2022-09-03
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Partial Genome
- Assembly method
- MEGAHIT v1.2.9
- Sequencing & coverage
- Illumina Novaseq 6000 10.0
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Fengjuan Tian, et al. Virome in healthy pangolins reveals compatibility with multiple potentially zoonotic viruses. Zoological Research. 2022, 43(6): 977-988.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBJST01000000 | - | Pangolin circovirus T1 | Draft genome in contig level | 2022-09-03 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,900 |
| GC content | 47.37% |
| Contig sequence No. | 1 |
| Maximum contig sequence length (bp) | 1,900 |
| Minimum contig sequence length (bp) | 1,900 |
| Average contig sequence length (bp) | 1,900 |
| Contig N50 (bp) | 1,900 |
| Contig N90 (bp) | 1,900 |