Genome Warehouse

Scientific Name: Jasminum sambac
Common Names: Arabian jasmine;
Bioproject: PRJCA006075
Biosample: SAMC440038
Accession No.: GWHBJVE00000000
GWH reannotation accession: -
GSA raw reads: CRR326026
GVM variations of the species: -
Submitter Organization: College of Agriculture Biotechnology, Zhejiang University
Contact: Liangsheng Zhang, zls83@zju.edu.cn
Sequence author(s): Min Xu, Qiang Gao, Liangsheng Zhang
Released Date: 2023-12-01
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: hifiasm 2021-2
3D-DNA v.180922
DipAsm 2021-3
Peregrine v.0.1.5.2
BWA-MEM v.0.7.17
juicer v.1.5
HapCUT2 v.1.1
Sequencing & coverage: PacBio 41.0
Illumina HiSeq 2500 148.0
Hi-C 179.0
Download: DNA GFF RNA CDS Protein
Publication(s): -

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHBJVE00000000	-	Consensus_jas_genome	Draft genome in chromosome level	2023-12-01	DNA GFF RNA CDS Protein

Genome size (bp)	537,990,819
GC content	35.57%
Genome sequence No.	397
Maximum genome sequence length (bp)	46,458,019
Minimum genome sequence length (bp)	15,000
Average genome sequence length (bp)	1,355,141
Genome sequence N50 (bp)	38,098,972
Genome sequence N90 (bp)	29,905,984

Annotation of Whole Genome Assembly

	Protein	Total
Total	39,634	39,634