- Scientific Name
- Lindera megaphylla
- Common Names
- -
- Bioproject
- PRJCA011596
- Biosample
- SAMC868680
- Accession No.
- GWHBKHA00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Bioinformatics, Ori-Gene Co., Ltd.
- Contact
- Rengang Zhang, zhangrengang@ori-gene.cn
- Sequence author(s)
- Ren-gang Zhang
- Released Date
- 2023-02-09
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- SMARTDENOVO v1.0
- Sequencing & coverage
- ONT 130.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Xuechan Tian, et al. Unique gene duplications and conserved microsynteny potentially associated with resistance to wood decay in the Lauraceae. Frontiers in Plant Science. 2023, 14: 1122549.
Statistics of Genome Assembly
| Genome size (bp) | 1,268,611,172 |
| GC content | 39.44% |
| Genome sequence No. | 486 |
| Maximum genome sequence length (bp) | 140,386,692 |
| Minimum genome sequence length (bp) | 25,002 |
| Average genome sequence length (bp) | 2,610,311 |
| Genome sequence N50 (bp) | 104,721,408 |
| Genome sequence N90 (bp) | 66,885,416 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Total | |
|---|---|---|---|---|---|
| Total | 32,586 | 579 | 248 | 803 | 34,216 |