- Scientific Name
- Cyclocarya paliurus
- Common Names
- qing qian liu;
- Bioproject
- PRJCA005987
- Biosample
- SAMC437963
- Accession No.
- GWHBKKW00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR309099
- GVM variations of the species
- -
- Submitter Organization
- Forestry College, Nanjing Forestry University
- Contact
- YINQUAN QU, qyquan@njfu.edu.cn
- Sequence author(s)
- YINQUAN QU
- Released Date
- 2022-09-14
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Pilon 2014
- Sequencing & coverage
- PacBio 125.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Yinquan Qu, et al. Whole-genome Duplication Reshaped Adaptive Evolution in A Relict Plant Species, Cyclocarya paliurus. Genomics, Proteomics & Bioinformatics. 2023, 11.
Statistics of Genome Assembly
| Genome size (bp) | 583,531,147 |
| GC content | 36.26% |
| Genome sequence No. | 500 |
| Maximum genome sequence length (bp) | 46,582,194 |
| Minimum genome sequence length (bp) | 1,000 |
| Average genome sequence length (bp) | 1,167,062 |
| Genome sequence N50 (bp) | 35,147,620 |
| Genome sequence N90 (bp) | 24,853,967 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 32,757 | 32,757 |