- Scientific Name
- Granulicatella adiacens
- Common Names
- Abiotrophia adiacens, Abiotrophia adjacens, Streptococcus adjacens
- Bioproject
- PRJCA011698
- Biosample
- SAMC878697
- Accession No.
- GWHBLKY00000000
- GWH reannotation accession
- GWHRA_BLKY00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Precision Health Institute, BGI Life Science Research Institute
- Contact
- Yuanqiang Zou, zouyuanqiang@genomics.cn
- Sequence author(s)
- Yuanqiang Zou
- Released Date
- 2025-02-08
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SOAPdenovo v2.04
- Sequencing & coverage
- Illumina HiSeq 2000 100
- Download
- DNA Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBLKY00000000 | GWHRA_BLKY00000000.1 | ORT-AF04-248 | Draft genome in scaffold level | 2025-02-08 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 1,772,796 |
| GC content | 39.26% |
| Scaffold sequence No. | 36 |
| Maximum scaffold sequence length (bp) | 186,461 |
| Minimum scaffold sequence length (bp) | 2,721 |
| Average scaffold sequence length (bp) | 49,244 |
| Scaffold N50 (bp) | 63,038 |
| Scaffold N90 (bp) | 23,335 |
Statistics of Genome Assembly
| Genome size (bp) | 1,772,796 |
| GC content | 39.26% |
| Scaffold sequence No. | 36 |
| Maximum scaffold sequence length (bp) | 186,461 |
| Minimum scaffold sequence length (bp) | 2,721 |
| Average scaffold sequence length (bp) | 49,244 |
| Scaffold N50 (bp) | 63,038 |
| Scaffold N90 (bp) | 23,335 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 1,692 | 17 | 3 | 1 | 15 | 63 | 1,791 |