- Scientific Name
- Streptococcus parasanguinis
- Common Names
- Streptococcus parasanguis
- Bioproject
- PRJCA011698
- Biosample
- SAMC878761
- Accession No.
- GWHBLNK00000000
- GWH reannotation accession
- GWHRA_BLNK00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Precision Health Institute, BGI Life Science Research Institute
- Contact
- Yuanqiang Zou(zouyuanqiang@genomics.cn)
- Sequence author(s)
- Yuanqiang Zou
- Released Date
- 2025-01-11
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SOAPdenovo v2.04
- Sequencing & coverage
- Illumina HiSeq 2000 100
- Download
- DNA
- Reannotation Download
- Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBLNK00000000 | GWHRA_BLNK00000000.1 | ODP-AM09-17-O-BH | Draft genome in scaffold level | 2025-01-11 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,052,639 |
| GC content | 42.10% |
| Scaffold sequence No. | 13 |
| Maximum scaffold sequence length (bp) | 538,773 |
| Minimum scaffold sequence length (bp) | 899 |
| Average scaffold sequence length (bp) | 157,895 |
| Scaffold N50 (bp) | 247,804 |
| Scaffold N90 (bp) | 116,977 |
Statistics of Genome Assembly
| Genome size (bp) | 2,052,639 |
| GC content | 42.10% |
| Scaffold sequence No. | 13 |
| Maximum scaffold sequence length (bp) | 538,773 |
| Minimum scaffold sequence length (bp) | 899 |
| Average scaffold sequence length (bp) | 157,895 |
| Scaffold N50 (bp) | 247,804 |
| Scaffold N90 (bp) | 116,977 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 1,925 | 36 | 3 | 1 | 22 | 29 | 2,016 |