- Scientific Name
- Lyophyllum decastes
- Common Names
- -
- Bioproject
- PRJCA012490
- Biosample
- SAMC918123
- Accession No.
- GWHBOVC00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR585092
- GVM variations of the species
- -
- Submitter Organization
- School of Life Science, Qingdao Agricultural University
- Contact
- Hao Yu, yuhaosunshine@163.com
- Sequence author(s)
- Hao Yu
- Released Date
- 2022-10-16
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- Necat 1.0
- Sequencing & coverage
- Illumina HiSeq 4000 100.0
- Download
- DNA
- Publication(s)
- Lili Xu, et al. Complete genome sequences and comparative secretomic analysis for theindustrially cultivated edible mushroom Lyophyllum decastes reveals insights onevolution and lignocellulose degradation potential. Frontiers in Microbiology. 2023, 14.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBOVC00000000 | - | LRG-d1-2 | Draft genome in contig level | 2022-10-16 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 40,046,239 |
| GC content | 50.35% |
| Contig sequence No. | 2,400 |
| Maximum contig sequence length (bp) | 642,394 |
| Minimum contig sequence length (bp) | 500 |
| Average contig sequence length (bp) | 16,686 |
| Contig N50 (bp) | 90,644 |
| Contig N90 (bp) | 9,774 |