- Scientific Name
- Ipomoea batatas
- Common Names
- batate; sweet potato; Ipomoea batatas var. edulis, Ipomoea tiliacea auct. non (Willd.) Choisy
- Bioproject
- PRJCA012249
- Biosample
- SAMC911136
- Accession No.
- GWHBOVE00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 40,831,917 (SNP), 9,404,695 (Indel)
- Submitter Organization
- Tropical Crops Institute, Hainan University
- Contact
- Xia Zhiqiang, zqxia@hainanu.edu.cn
- Sequence author(s)
- Xia Zhiqiang
- Released Date
- 2022-10-15
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm Hifiasm-0.16.1 (r375)
- Sequencing & coverage
- PacBio 65.0
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBOVE00000000 | - | sweetpotato.v1.1.asm.fasta | Draft genome in chromosome level | 2022-10-15 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 3,462,584,341 |
| GC content | 36.89% |
| Genome sequence No. | 11,696 |
| Maximum genome sequence length (bp) | 73,067,977 |
| Minimum genome sequence length (bp) | 1,000 |
| Average genome sequence length (bp) | 296,049 |
| Genome sequence N50 (bp) | 37,925,475 |
| Genome sequence N90 (bp) | 28,075,456 |