- Scientific Name
- viral metagenome
- Common Names
- -
- Bioproject
- PRJCA002898
- Biosample
- SAMC1000079
- Accession No.
- GWHBPAV00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Chinese Academy of Sciences(CAS), Qingdao Institute of Bioenergy and Bioprocess Technology(QIBEBT), Chinese Academy of Sciences(CAS)
- Contact
- Jiulong Zhao, zhaojl@qibebt.ac.cn
- Sequence author(s)
- Zengmeng Wang
- Released Date
- 2023-02-07
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Partial Genome
- Assembly method
- metaSPAdes v3.12.0
- Sequencing & coverage
- Illumina NovaSeq 6000 10000.0
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Jiulong Zhao, et al. Significant Differences in Planktonic Virus Communities Between 'Cellular Fraction' (0.22~3.0 µm) and 'Viral Fraction' (<0.22 μm) in the Ocean. Microbial Ecology. 2022.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBPAV00000000 | - | V-vMAGs | Draft genome in scaffold level | 2023-02-07 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 28,380,043 |
| GC content | 44.56% |
| Scaffold sequence No. | 514 |
| Maximum scaffold sequence length (bp) | 461,526 |
| Minimum scaffold sequence length (bp) | 5,014 |
| Average scaffold sequence length (bp) | 55,214 |
| Scaffold N50 (bp) | 60,013 |
| Scaffold N90 (bp) | 31,485 |