- Scientific Name
- Brassica napus
- Common Names
- oilseed rape, rapeseeds; rape;
- Bioproject
- PRJCA013095
- Biosample
- SAMC999588
- Accession No.
- GWHBPBJ00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 19,435,228 (SNP), 6,355,636 (Indel)
- Submitter Organization
- Genomics and Disease Resistance Improvement of Oil Crops, Oil Crops Research Institute, Chinese Academy of Agricultural Sciences
- Contact
- Yuanyuan zhang, zhangyy@caas.cn
- Sequence author(s)
- Yuanyuan zhang
- Released Date
- 2024-11-21
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Partial Genome
- Assembly method
- Canu 1.8
wtdbg2 2.5
Miniasm 0.3
Flye 2.4.1
SMRTdenovo Feb 24, 2021 - Sequencing & coverage
- Oxford Nanopore 31.67
Illumina NovaSeq 6000 80.39 - Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBPBJ00000000 | - | GDRP172.genome | Draft genome in contig level | 2024-11-21 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,009,334,171 |
| GC content | 37.16% |
| Contig sequence No. | 3,068 |
| Maximum contig sequence length (bp) | 8,537,891 |
| Minimum contig sequence length (bp) | 3,525 |
| Average contig sequence length (bp) | 328,988 |
| Contig N50 (bp) | 2,044,377 |
| Contig N90 (bp) | 90,322 |