- Scientific Name
- Brassica napus
- Common Names
- oilseed rape, rapeseeds; rape;
- Bioproject
- PRJCA013095
- Biosample
- SAMC999591
- Accession No.
- GWHBPBM00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 19,435,228 (SNP), 6,355,636 (Indel)
- Submitter Organization
- Genomics and Disease Resistance Improvement of Oil Crops, Oil Crops Research Institute, Chinese Academy of Agricultural Sciences
- Contact
- Yuanyuan zhang, zhangyy@caas.cn
- Sequence author(s)
- Yuanyuan zhang
- Released Date
- 2024-11-21
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Partial Genome
- Assembly method
- Canu 1.8
wtdbg2 2.5
Miniasm 0.3
Flye 2.4.1
SMRTdenovo Feb 24, 2021 - Sequencing & coverage
- Oxford Nanopore 36.38
Illumina NovaSeq 6000 59.80 - Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBPBM00000000 | - | GDRP131.genome | Draft genome in contig level | 2024-11-21 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,049,012,309 |
| GC content | 37.16% |
| Contig sequence No. | 3,393 |
| Maximum contig sequence length (bp) | 10,960,409 |
| Minimum contig sequence length (bp) | 2,969 |
| Average contig sequence length (bp) | 309,170 |
| Contig N50 (bp) | 1,846,314 |
| Contig N90 (bp) | 93,923 |