- Scientific Name
- Acipenser sinensis
- Common Names
- Chinese sturgeon;
- Bioproject
- PRJCA014141
- Biosample
- SAMC1034295
- Accession No.
- GWHBQEF00000000
- GWH reannotation accession
- -
- GSA raw reads
-
CRR638053,
CRR638075,
CRR638054,
CRR638076,
CRR638073,
more
CRR638052, CRR638074, CRR638071, CRR638093, CRR638072,
CRR638091, CRR638070, CRR638092, CRR638059, CRR638057,
CRR638079, CRR638058, CRR638055, CRR638077, CRR638056,
CRR638078, CRR638090, CRR638064, CRR638086, CRR638065,
CRR638087, CRR638062, CRR638084, CRR638063, CRR638085,
CRR638060, CRR638082, CRR638061, CRR638083, CRR638080,
CRR638081, CRR638068, CRR638069, CRR638066, CRR638088,
CRR638067, CRR638089, hide - GVM variations of the species
- -
- Submitter Organization
- Species conservation department, Chinese Sturgeon Research Institute, China Three Gorges Corporation
- Contact
- Binzhong Wang(zhuyi87@foxmail.com)
- Sequence author(s)
- Binzhong Wang
- Released Date
- 2024-05-15
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Smartdenovo r241
- Sequencing & coverage
- PacBio 111.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Binzhong Wang, et al. Whole-genome Sequencing Reveals Autooctoploidy in Chinese Sturgeon and Its Evolutionary Trajectories. Genomics, Proteomics & Bioinformatics. 2023.
Statistics of Genome Assembly
| Genome size (bp) | 1,995,374,126 |
| GC content | 40.76% |
| Genome sequence No. | 309 |
| Maximum genome sequence length (bp) | 122,797,157 |
| Minimum genome sequence length (bp) | 15,252 |
| Average genome sequence length (bp) | 6,457,521 |
| Genome sequence N50 (bp) | 48,462,029 |
| Genome sequence N90 (bp) | 13,550,145 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 34,114 | 34,114 |