- Scientific Name
- Polyporus umbellatus
- Common Names
- -
- Bioproject
- PRJCA008746
- Biosample
- SAMC689215
- Accession No.
- GWHBQTP00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- -, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences
- Contact
- Zhongyi Hua, njbxhzy@hotmail.com
- Sequence author(s)
- Yuan Yuan
- Released Date
- 2023-01-14
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- Canu V1.8
- Sequencing & coverage
- Illumina HiSeq 2000 58.18
PacBio 74.02 - Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Pengjie Han, et al. PuCRZ1, an C2H2 transcription factor from Polyporus umbellatus, positivelyregulates mycelium response to osmotic stress. Frontiers in Microbiology. 2023, 14.
Statistics of Genome Assembly
| Genome size (bp) | 79,742,430 |
| GC content | 50.63% |
| Scaffold sequence No. | 318 |
| Maximum scaffold sequence length (bp) | 3,348,745 |
| Minimum scaffold sequence length (bp) | 498 |
| Average scaffold sequence length (bp) | 250,762 |
| Scaffold N50 (bp) | 969,734 |
| Scaffold N90 (bp) | 121,701 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 10,426 | 10,426 |