- Scientific Name
- Hevea brasiliensis
- Common Names
- jebe, Para rubber tree, siringa; rubber tree;
- Bioproject
- PRJCA006928
- Biosample
- SAMC470277
- Accession No.
- GWHBGWZ00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- CRR332559
- GVM variations of the species
- 9,584,819 (SNP), - (Indel)
- Submitter Organization
- Breeding, Rubber Research Institute, Chinese Academy of Tropical Agricultural Sciences
- Contact
- Han Cheng, forcheng@gmail.com
- Sequence author(s)
- Han Cheng
- Released Date
- 2023-02-05
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Nextdenovo 2020
- Sequencing & coverage
- Oxford Nanopore 273.0
- Download
- DNA
- Publication(s)
- Han Cheng, et al. Chromosome-level wild Hevea brasiliensis genome provides new tools forgenomic-assisted breeding and valuable loci to elevate rubber yield. Plant Biotechnology Journal. 2023, 21(5): 1058-72.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBGWZ00000000 | - | m2 | Draft genome in chromosome level | 2022-12-29 |
DNA
|
| GWHBGWZ00000000.1 | - | hbv1.1 | Draft genome in chromosome level | 2023-02-05 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,884,382,681 |
| GC content | 34.70% |
| Chromosomes sequence No. | 18 |
| Genome sequence No. | 755 |
| Maximum genome sequence length (bp) | 128,648,466 |
| Minimum genome sequence length (bp) | 515 |
| Average genome sequence length (bp) | 2,495,871 |
| Genome sequence N50 (bp) | 101,662,298 |
| Genome sequence N90 (bp) | 59,093,531 |