- Scientific Name
- Abelmoschus esculentus
- Common Names
- gumbo, kacang bendi, lady's fingers, lady's-fingers, okra, quiabo; Hibiscus esculentus
- Bioproject
- PRJCA014840
- Biosample
- SAMC1075592
- Accession No.
- GWHBWBG00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- School of Life Sciences, Hebei University
- Contact
- Huilong Du(huilongdu@hbu.edu.cn), Longsheng Xing(xingls@hbu.edu.cn), Ruyu Wang(1284615724@163.com)
- Sequence author(s)
- Huilong Du, Longsheng Xing, Ruyu Wang
- Released Date
- 2023-07-13
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- CANU 2.1.1
- Sequencing & coverage
- PacBio 25.0
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Ruyu Wang, et al. The genome of okra (Abelmoschus esculentus) provides insights into its genome evolution and high nutrient content. Horticulture Research. 2023, 10(8): uhad120.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBWBG00000000 | - | okra | Draft genome in chromosome level | 2023-07-13 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,191,037,140 |
| GC content | 33.79% |
| Chromosomes sequence No. | 36 |
| Genome sequence No. | 78 |
| Maximum genome sequence length (bp) | 29,371,741 |
| Minimum genome sequence length (bp) | 5,160 |
| Average genome sequence length (bp) | 15,269,707 |
| Genome sequence N50 (bp) | 18,929,180 |
| Genome sequence N90 (bp) | 13,067,450 |