- Scientific Name
- Dasypyrum villosum
- Common Names
- Haynaldia villosa, Secale villosum
- Bioproject
- PRJCA015995
- Biosample
- SAMC1187464
- Accession No.
- GWHCBFL00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Institute of Germplasm Resources and Biotechnology, Jiangsu Academy of Agricultural Sciences
- Contact
- CAIYUN LIU, caiyun1166@163.com
- Sequence author(s)
- CAIYUN LIU
- Released Date
- 2023-04-09
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- Meraculous 2021
- Sequencing & coverage
- Illumina NovaSeq 6000 75.5
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- CAIYUN LIU. Introgression of sharp eyespot resistance from Dasypyrum villosum chromosome 2VL into bread wheat by molecular cytogenetic approaches. The Crop Journal. 2023.
Statistics of Genome Assembly
| Genome size (bp) | 384,279,840 |
| GC content | 46.74% |
| Scaffold sequence No. | 40,075 |
| Maximum scaffold sequence length (bp) | 172,563 |
| Minimum scaffold sequence length (bp) | 1,000 |
| Average scaffold sequence length (bp) | 9,589 |
| Scaffold N50 (bp) | 20,718 |
| Scaffold N90 (bp) | 3,916 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | Total | |
|---|---|---|---|---|
| Total | 2,230 | 185 | 8 | 2,423 |