- Scientific Name
- Acorus gramineus
- Common Names
- shi chang pu;
- Bioproject
- PRJCA016240
- Biosample
- SAMC1192745
- Accession No.
- GWHCBFW00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR732167
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Agricultural Genomics, BGI-Shenzhen, BGI
- Contact
- Dongming Fang, fangdongming@genomics.cn
- Sequence author(s)
- Xing Guo
- Released Date
- 2023-04-16
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Assembly method
- null V2.2
- Sequencing & coverage
- null 100.0
- Download
-
DNA
GFF
RNA
Protein
- Publication(s)
- Xing Guo, et al. The genome of Acorus deciphers insights into early monocot evolution. Nature Communications. 2023, 14.
Statistics of Genome Assembly
| Genome size (bp) | 396,096,871 |
| GC content | 39.88% |
| Chromosomes sequence No. | 12 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 13,986 | 13,986 |
| Total | 13,986 | 13,986 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 1,784 | 1,784 |
| chr10 | 803 | 803 |
| chr11 | 718 | 718 |
| chr12 | 723 | 723 |
| chr2 | 1,335 | 1,335 |
| chr3 | 1,413 | 1,413 |
| chr4 | 1,162 | 1,162 |
| chr5 | 1,406 | 1,406 |
| chr6 | 1,070 | 1,070 |
| chr7 | 1,393 | 1,393 |
| chr8 | 1,303 | 1,303 |
| chr9 | 876 | 876 |
| Total | 13,986 | 13,986 |