- Scientific Name
- Citrus limon
- Common Names
- lemon; Citrus limonum Risso, 1813
- Bioproject
- PRJCA016208
- Biosample
- SAMC1192119
- Accession No.
- GWHCBFQ00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- State Key Lab for Conservation and Utilization of Subtropical Agric-Biological Resources, Guangxi University
- Contact
- Bao yixue, 957731289@qq.com
- Sequence author(s)
- Bao yixue
- Released Date
- 2023-04-22
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- minimap 2.0
- Sequencing & coverage
- PromethION 310.0
- Download
- DNA GFF RNA Protein
- Publication(s)
- Yixue Bao, et al. A gap-free and haplotype-resolved lemon genome provides insights into flavorsynthesis and huanglongbing (HLB) tolerance. Horticulture Research. 2023, 10(4).
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHCBFQ00000000 | - | lemon | Draft genome in scaffold level | 2023-04-14 |
DNA
|
| GWHCBFQ00000000.1 | - | lemon | Draft genome in scaffold level | 2023-04-22 |
DNA
GFF
RNA
Protein
|
Statistics of Genome Assembly
| Genome size (bp) | 633,006,086 |
| GC content | 34.44% |
| Chromosomes sequence No. | 18 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 62,633 | 62,633 |
| Total | 62,633 | 62,633 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chrA1 | 3,032 | 3,032 |
| chrA2 | 3,820 | 3,820 |
| chrA3 | 3,729 | 3,729 |
| chrA4 | 3,180 | 3,180 |
| chrA5 | 5,335 | 5,335 |
| chrA6 | 2,736 | 2,736 |
| chrA7 | 3,113 | 3,113 |
| chrA8 | 3,091 | 3,091 |
| chrA9 | 2,986 | 2,986 |
| chrB1 | 2,876 | 2,876 |
| chrB2 | 3,884 | 3,884 |
| chrB3 | 3,666 | 3,666 |
| chrB4 | 3,411 | 3,411 |
| chrB5 | 5,092 | 5,092 |
| chrB6 | 2,893 | 2,893 |
| chrB7 | 3,470 | 3,470 |
| chrB8 | 3,197 | 3,197 |
| chrB9 | 3,122 | 3,122 |
| Total | 62,633 | 62,633 |