Scientific Name
Portulaca oleracea
Common Names
-
Bioproject
PRJCA017233
Biosample
SAMC1266009
Accession No.
GWHCBIU00000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences
Contact
Xiaoliang Wang, wangxl_01@126.com
Sequence author(s)
Xiaoliang Wang
Released Date
2023-05-27
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
Smartdenovo v1.0
Sequencing & coverage
Nanopore 80.0
Download
DNA GFF RNA CDS Protein
Publication(s)
Xiaoliang Wang, et al. Gene duplications facilitate C4-CAM compatibility in common purslane. Plant Physiology. 2023.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHCBIU00000000 - Genome of Portulaca oleracea Draft genome in chromosome level 2023-05-27 DNA GFF RNA CDS Protein

Statistics of Genome Assembly

Genome size (bp) 1,134,782,496
GC content 37.65%
Chromosomes sequence No. 26
Genome sequence No. 68
Maximum genome sequence length (bp) 66,044,159
Minimum genome sequence length (bp) 2,570
Average genome sequence length (bp) 16,687,978
Genome sequence N50 (bp) 43,531,389
Genome sequence N90 (bp) 34,119,552
Annotation of Whole Genome Assembly
Protein Total
Chromosome 45,020 45,020
Others 197 197
Total 45,217 45,217
Annotation Details
ChrID Protein Total
chr1 2,717 2,717
chr10 1,455 1,455
chr11 1,551 1,551
chr12 1,642 1,642
chr13 1,526 1,526
chr14 1,742 1,742
chr15 1,609 1,609
chr16 1,517 1,517
chr17 1,493 1,493
chr18 1,746 1,746
chr19 1,329 1,329
chr2 2,711 2,711
chr20 1,396 1,396
chr21 1,137 1,137
chr22 1,450 1,450
chr23 1,078 1,078
chr24 1,232 1,232
chr25 1,263 1,263
chr26 922 922
chr3 2,336 2,336
chr4 3,476 3,476
chr5 2,185 2,185
chr6 1,786 1,786
chr7 1,992 1,992
chr8 1,773 1,773
chr9 1,956 1,956
Others 197 197
Total 45,217 45,217