- Scientific Name
- Bursaphelenchus xylophilus
- Common Names
- pine wilt nematode, pinewood nematode; pine wood nematode; Aphelenchoides xylophilus
- Bioproject
- PRJCA001332
- Biosample
- SAMC064536
- Accession No.
- GWHAASP00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences / China National Center for Bioinformation
- Contact
- Jianghua Sun(sunjh@ioz.ac.cn)
- Sequence author(s)
- Jianghua Sun
- Released Date
- 2021-03-15
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Partial Genome ( Nuclear )
- Assembly method
- Platanus 1.2.1
- Sequencing & coverage
- Illumina HiSeq 2000 259.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 71,901,233 |
| GC content | 40.86% |
| Scaffold sequence No. | 2,972 |
| Maximum scaffold sequence length (bp) | 3,531,195 |
| Minimum scaffold sequence length (bp) | 500 |
| Average scaffold sequence length (bp) | 24,193 |
| Scaffold N50 (bp) | 732,544 |
| Scaffold N90 (bp) | 76,388 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 15,660 | 15,660 |