- Scientific Name
- Oryza sativa
- Common Names
- red rice, rice; Asian cultivated rice;
- Bioproject
- PRJCA017591
- Biosample
- SAMC1305984
- Accession No.
- GWHDLVN00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 18,166,415 (SNP), 952,283 (Indel)
- Submitter Organization
- State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
- Contact
- Dai Rui(raydai@genetics.ac.cn)
- Sequence author(s)
- Dai Rui
- Released Date
- 2025-06-26
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- megahit v1.2.9
metaWRAP v1.3.2 - Sequencing & coverage
- Illumina NovaSeq 6000 310.3060541
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDLVN00000000 | - | MAG_Rc_HFMb045 | Draft genome in scaffold level | 2025-06-26 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 3,735,907 |
| GC content | 64.29% |
| Scaffold sequence No. | 494 |
| Maximum scaffold sequence length (bp) | 60,329 |
| Minimum scaffold sequence length (bp) | 1,516 |
| Average scaffold sequence length (bp) | 7,563 |
| Scaffold N50 (bp) | 11,171 |
| Scaffold N90 (bp) | 3,412 |